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Mol. Hum. Reprod. Advance Access originally published online on November 4, 2006
Molecular Human Reproduction 2007 13(1):61-67; doi:10.1093/molehr/gal095
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© The Author 2006. Published by Oxford University Press on behalf of the European Society of Human Reproduction and Embryology. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

Identification of two novel quantitative trait loci for pre-eclampsia susceptibility on chromosomes 5q and 13q using a variance components-based linkage approach

M.P. Johnson1,6, E. Fitzpatrick2,3, T.D. Dyer1, J.B.M. Jowett4,5, S.P. Brennecke2,3, J. Blangero1 and E.K. Moses1

1Department of Genetics, Southwest Foundation for Biomedical Research, San Antonio, TX, USA, 2Department of Perinatal Medicine, Royal Women’s Hospital, 3Department of Obstetrics and Gynaecology, University of Melbourne, Carlton, 4International Diabetes Institute, Caulfield and 5ChemGenex Pharmaceuticals, Geelong, Melbourne, Australia

6 To whom the correspondence should be addressed at: Department of Genetics, Southwest Foundation for Biomedical Research, PO Box 760549, San Antonio, TX 78245-0549, USA. E-mail: mjohnson{at}darwin.sfbr.org


   Abstract

Pre-eclampsia/eclampsia (PE/E) is a common and serious disorder of human pregnancy that is associated with substantial maternal and perinatal morbidity and mortality. The suspected aetiology of PE/E is complex, with susceptibility being attributable to multiple environmental factors and a large genetic component. By assuming that the underlying liability towards PE/E susceptibility is inherently quantitative, any PE/E susceptibility gene would represent a quantitative trait locus (QTL). This assumption enables a more refined and powerful variance components procedure using a threshold model for our PE/E statistical analysis. Using this more efficient linkage approach, we have now re-analysed our previously completed Australian/New Zealand genome scan data to identify two novel PE/E susceptibility QTLs on chromosomes 5q and 13q. We have obtained strong evidence of linkage on 5q with a peak logarithm-of-odds (LOD) score of 3.12 between D5S644 and D5S433 [at ~121 centimorgan (cM)] and strong evidence of linkage on 13q with a peak LOD score of 3.10 between D13S1265 and D13S173 (at ~123 cM). Objective identification and prioritization of positional candidate genes using the quantitative bioinformatics program GeneSniffer revealed highly plausible PE/E candidate genes encoding aminopeptidase enzymes and a placental peptide hormone on the 5q QTL and two type IV collagens on the 13q QTL regions, respectively.

Key words: genome scan/linkage/pre-eclampsia/quantitative trait/variance components


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